#NEXUS

[Calepineae alignment, status checked Jan 09 2018]
[ITS-1: 1-295, 5.8S rDNA: 296-459, ITS-2: 460-663]


BEGIN DATA;
DIMENSIONS NTAX=8 NCHAR=663;
FORMAT DATATYPE=DNA GAP=- MISSING=? ;

MATRIX
Calepina_irregularis_AM905715         TCGATACCTTGACCAAAACAAAACGACCCGAGAACGATTGATCATTACTCTCGGTGGGCCGAT-TTCTTAACTGATCTCGTGCCTGCCGATTCCGTGGTTTCGCGTAAGTTCCATGTCTTGAATTTTT---CTTGGCTAG-TAGGT-------------------CCTTACGTGTTGCTTCCGGATATCACAAAACCCCGGCACAAATAGTGTCAAGGAACATGCAACCAAACAGTTTGCGTTCGCCTCCCCGGAGACGGTGTGTGTGCGGATGCGGTGCTGCAAAATAAAGTCTAAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGTGTCACAAATCGTCGTCCCCC--CATCC-TCTTCG--GATAAGGGACGGAAGTTGGTCTCCCGTGTGTTACCGCACGCGGTTGGCCAAAATCCGAGCTAAGGACGCCAGGAGCGTCTCGACATGCGGTGGTGAA-TTAAAGCATCTT---------CATATTGTCGGATGCTCCTGTCCGG---ATGCTTTCGATGACCCAAAGTCCTCAAC
Goldbachia_laevigata_DQ357545         TCGATACCTTGTCCAAAACAAGACGACCCGAGAACGATCGATCATCACTCTCGGTGGGCCGGT-TTCTTAGCTGATCCCGTGCCCGCCGATTCCGTGGTTTCGCGTTAAGCTCCCATCAAGAATTCTT--T-----CTTGGTTGGG-------------------TCTTGCGCGTAGCTTCCGGATATCACAAAACCCCGGCACAAATTGTGTCAAGGAACATGCAACCAAACAGCCTGCGTTCGTCGCCCCGGAGACGGTGTGTGTGCGGATGCGGTGCTGTGATATAAAGTCTAAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTTTGGCCGAGGGCACGTCTGCCTGGGTGTCACAAATCGTCGTCCCCC--AATCC-TCTTTG--GATACGGGACGGAAGCTGGTCTCCCGTGTGTTACCGCACGCGGTTGGCCAAAATCCGAGCCAAGGACGCCARGAGCGTCTCGACATGCGGTGGTGAA-TACAAGCCTCTT---------GATGTTGTCGGTCGCTCTTGTCCGG---AAGCTCTCGATGACCCAAAGTCCTCAAC
Goldbachia_pendula_FM164536_FM164537  TCGATACCTTGTTCAAAACAAGACGACCCGAGAACGATCGATCATCACTCTCGGTGGGCCGGT-TTYTTAGCTGATCCCGTGCCCGCCGATTCCGTGGTTTCGCGTTAAGCTCCCATCAAGAATTCTT--T-----CTTGGTTGGG-------------------TCTTGCGCGTAGCTTCCGGATATMACAAAACCCCGGCACAAATTGTGTCAAGGAACATGCAACCAAACAGCCTGCGTTCGTCGCCYCGGARACGGTGTGTGTGCGGATGCGGTRCYRWNAACTAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGTCGTCCCCC--AATCC-TCTTTG--GATACGGGACGGAAGCTGGTCTCCCGTGTGTTACCGCACGCGGTTGGCCAAAATCCGAGCCAAGGACGCCARGAGCGTCTCGACATGCGGTGGTGAA-TACAAGCCTCTT---------GATGTTGTCGGTCGCTCTTGTCCGG---AAGCTCTCGATGACCCNNNNNNNNNNNN
Goldbachia_sabulosa_KJ623522          TCGATACCTTGTCCAAAACAAGACGACCCGAGAACGATCGATCATCACTCTCGGTAGGCCGGT-TTCTTAACTGATCTCGTGCCTACCGATTCCGTGGTTTCGCGTTAAGTCCCCATCAAGAATATTT--T-----CTCGGTTGGG-------------------TCTTGCGTGTTGCTTCCGGATATCACAAAACCCCGGCACAAATTGTGTCAAGGAACATGCAACCAAACAGCCTGCGTTCGTCGCCCCGGAGACGGTGTGTGTGCGGATGCAGTGCTGCGATATAAAGTCTAAA-CGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGTGTCACAAATCGTCGTCCCCC--AATCC-TTTTCG--GATAAGGGACGGAAGCTGGTCTCCCGTGTGTTACCGCACGCGGTTGGCCAAAATCCGAGCCAAGAACGCCGGGAGCGTCTCGACATGCGGTGGTGAA-TACAAGCCTCTT---------GGTATTGTCGGTCGCTCTTGTCCGG---AAGCTTTCGATGACCCAA-ATTCTCAAC
Goldbachia_verrucosa_HG426446         TCGATACCTTGTCCAAAACAAGACGACCCGAGAACGATTGATCATCACTCTCGGTGGGCCGGT-TTCTTAGCTGATCCCGTGCCTGCCGATTCCGTGGTTTCACGTAAAGTCCCGATCAAGA-TTTTT--T-----CTTGGTTTGG-------------------TCTTGCGCGTAGCTTCCGGATATCACAAAAACCCGGCACAAACTGTGTCAAGGAACATGCAACGAAACAGCCTGCGTTCGCCGCCTCGGAGACGGTGTGTGTGCGGATGCGGTGCTGTAATATATAGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCGTCGTCCCCC--AATCC-TCTTTG--GATACGGGACGGAAGCTGGTCTCCCGTGTGTTACCGCACGCGGTTGTCCAAAATCCGAGCTAAGGACGCCAAGAGCGTCTCGACATGCGGTGGTGAA-TTCAAGCCTCTT---------CATATTGTTGGTCGCTCTTGTCTGG---AAGCTTTCGATGACCCAAAGTCCTCAAC
Leiocarpaea_cochlearioides_FM958514   TCGATACCTTGTCCAAAACAAAACGACCCGAGAACGCTTNATCATCACTCTCGGTGGGCCGAT-TTCTTAGTTGATCTCGTGTCTGCCGATTCCGTGGTTTCGCGTAAGTTTCCCATCAAGA---TTTAAT-----CTCGGTCGGG-------------------TCTTGCGCGTAGCTTCCGGATATCACAAAACCCCGGCACGAAAAGTGTCAAGGAACATACAACCAAACAGCCTGTGTTCGTCGCCCCGGAGACGGTGTGTGTGCGGATGCGGTGCTGCAATATAAAGTCTAAAACGACTCTCG-CAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGTGTCACAAATCGTCGTCCC-C--CATCC-TATTTG--GATATGGGACGGAAGCTGGTCTCCCGTGTGATACCGCATGCGGTTGGCCAAAATCCGAGCAAAGGATGCCAAGAGCGTCTCGACATGCGGTGGTGAA-TTCAAGCCTCTT---------CATATTGTTGGGCGCTCTTGTCTGA---AAGCTCTATATGACCCAA-GTTCTCAAC
OUTArabidopsisthalianaAJ232900        TCGATACC-TGTCCAAAACAGAACGACCCGCGAACCAAAGATCACCACTCTCGGTGGGCCGGT-TTCTTAGCCGATTCCTTGCCCGCCGGATCCGTGGTTTCGCGTA-------------------------TCGGCATGATCGGGAGCTTTTATCTCGGTCTTGTCGTGCGCGTTGCTTCCGGATATCACAAAACCCCGGCACGAAAAGTGTCAAGGAACATGCAAACGAACGGCTGGCATTCGCCTCCCCGGAGACGGAGTGTGGGCGGATGCTGTGCTGCGAACTGAAGTCTAAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGTGTCACAAATCGTCGTCCCTCACCATCC---TTTGCTGATGCGGGACGGAAGCTGGTCTCCCGTGTGTTACCGCACGCGGTTGGCCTAAATCCGAGCCAAGGACGCCTGGAGCGTACCGACATGCGGTGGTGAA----------CTTGATCCATTACATTTTATCGGTCGCTCTTGTCCGG---AAGCTGTAGATGACCCAAAGTCCATATA
OUTClausiaapricaDQ357529              TCGATACC-TGTCCAAAACAGAACGACCAGCGAACGAGAGATCATCACTCTCGGCGGGCCGATTTTCCTAGCGGATCTCGTGCCCGCCAAGTCCGTGGTTTTGCGTACTGTTCCCATGAAGA---GTT----TCGGCTCGATTGGG-------------------TCATGCGCTCAGCTTCCGGATATCACAAAACCCCGGCACGAAAAGTGCCAAGGAACATGAAACTAAACAGCTTGCGTTCGCTGCCCCGGAGACGGTGTGCGTGCGGATGACAAGCTGCAATCTAAAGTCTAAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTCGGGCCGAGGGCACGTCTGCCTGGGTGTCACAAATCGTCGTCCCCC--CATCCATCTTTG--GATAAGGGACGGAAGCTGGTCTCCCGTGTGTTACCGCACGCGGTTGGCCAAAATCCGAGNTTAGGACGTCTGGAGCGTCTCGACATGCGGTGGTGAAACAAAAGCCTCTT---------CGTTGAGTCGGTCGTTCCTGTCCGTTACGAGCTTTCGATGACCCAAAGTTCTCAAC
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